Data

Trained Models

• Bepler & Berger language model

• Human TT3D model

• Human Topsy-Turvy model (recommended)

• Human D-SCRIPT model (from original D-SCRIPT paper)

Pre-trained models can be loaded in the prediction script from HuggingFace hub by specifying the model name. For example, to load the Topsy-Turvy model, use samsl/topsy_turvy_v1.

Sample Data

Sequences

• Human

• Mouse

• Fly

• Yeast

• Worm

• E.coli

Interactions

• Human Train

• Human Test

• Mouse Test

• Fly Test

• Yeast Test

• Worm Test

• E. coli Test